Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942295.1_cds_XP_016485815.1_76706
CDS Infomation

[gene=LOC107806205] [db_xref=GeneID:107806205] [protein=basic proline-rich protein-like] [protein_id=XP_016485815.1] [location=join(7045..7125,8156..8249,9270..9355,12010..12059,12181..12250,12335..12416,12502..12920,13059..13538,15792..16004)] [gbkey=CDS]
Sequence

ATGAAGACGACCAAAGGAGGCAAAGTCATGAACCCTACCGACGCTTATCGCAAGGAACAA
CGCAAAAGGGAATTGAAAAGGAACAAGAAAGAGAGGAAGAAAGTGAGAGAAGTGGGTATA
TTGAAGAAGGATCCGGACCAACTAAAAGATCAGATTCAGAAACTAGAAGTGATGAAGGCG
GAGGGAGCGCTAGACAAAGCAAGGAAACATAAAAAGAGACAACTTGAAGATACACTTAAT
CTTGTTCTCAAAAAGAGAAAGGAGTATGAAGAAAAACTGAAAGAAAAGGGCGAACAGCCA
GTCATGTTTAGTCACTTGGGCCCTCCTCGAAGGCGGACCTCTGCTGAAGAGGAAGAAATG
GTCAAGCATCCAAAACCTGAAGACTCGGTCTACTATCACCCTACTCTAAATCCAACTGGA
GCTCCTCCTCCTGGAAAACCTCCTATGTTTAAGTCATCCATTGGATCTCGAGTACCATTA
TCTGCGGCTTCATCAAGCGGTACAGCATCATCATCACAGTTGGATGGAGAAGATGGCAGC
TTATCAACTCTTCCTCCACCACCTCCACCACCTCCATTGCCCCAGAGTGGTGATGCAGAT
TCTGTGGATGTGTCTGCGATGCCTGCATCTTTACCTTTACCACCTCCACCTCCTATGCCC
CCAAAGCCCGTGACAGAAATGAGCACTTCATTGCCACTGCCTCCTTTGCCCCCACCACCT
CCTGGTCCCCCACCAAAGGAACAGGTTGCCGTTCACCTTCCACTTCCTCCACCTCCCGCA
CCTCCCCTTCAGCCATCTGCTCAACCTCCTCCCCCCGGCACTGGTGGAAGTGAAAGGGAT
AGAAATAACCTGGACAATCCAGCTTCAGTAGAACTAATGCCGCCTCCTCTTCCACCGGGC
TTGCCATTGAAGTCAGATGGCACATCTGTTGAATCTGATGCTAAAGCTTCCTCAGAGTCG
AAAGATCATGTTAGATTGCCACCGCCACCTCCACCACCTCCAAGGCAACAGCCTTCAGTT
CCTGGAGCTGCCATGGTCCCAACTTTGCATCATGATGTATTACCTCCTGGACTTCCTCGG
TTCCCTCCACCCCCACCCCCGACTGACATGCGGCCACCACCTGGAATTGCCGGCCAGCTT
GCTCCACCTGGAGTCATGCTCTCACTTATGCCAAGACCACCTTTCGGACCTCCTCCTGGT
CCTCCACCAATGATGAGACCGCCACTTCCGCCTGGTCCCCCTCCTTATCTACAAGATGGT
GCCAGACCACTTGCCACTCAGAAGCCATCATATGTTAAATCAGCTGCTTCAACCGTTGTT
AAGAGGCCTCTAGCTCAGCATACACCAGAACTTACAGCTATGGTTCCTGCTTCTGTGCGT
GTTAGGAGAGAATCTGCAGTTCCAAAACCCAAACCAAAGTCATCGAACACGATTATTGTC
AACCAGCCAGCAGTAGCTCCAGCTGTTGTCAAGCATGAATCAACTAGCGCATCTGCACCA
AAACCTCAAAGCGTTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCACTTGGT
GCTCTTGATAGCTGA

Peptide Sequence

PEP ID

XP_016485815.1
PEP Infomation

PREDICTED: basic proline-rich protein-like [Nicotiana tabacum]
Sequence

MKTTKGGKVMNPTDAYRKEQRKRELKRNKKERKKVREVGILKKDPDQLKDQIQKLEVMKA
EGALDKARKHKKRQLEDTLNLVLKKRKEYEEKLKEKGEQPVMFSHLGPPRRRTSAEEEEM
VKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGSRVPLSAASSSGTASSSQLDGEDGS
LSTLPPPPPPPPLPQSGDADSVDVSAMPASLPLPPPPPMPPKPVTEMSTSLPLPPLPPPP
PGPPPKEQVAVHLPLPPPPAPPLQPSAQPPPPGTGGSERDRNNLDNPASVELMPPPLPPG
LPLKSDGTSVESDAKASSESKDHVRLPPPPPPPPRQQPSVPGAAMVPTLHHDVLPPGLPR
FPPPPPPTDMRPPPGIAGQLAPPGVMLSLMPRPPFGPPPGPPPMMRPPLPPGPPPYLQDG
ARPLATQKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRRESAVPKPKPKSSNTIIV
NQPAVAPAVVKHESTSASAPKPQSVDDSYTAFLEDMKALGALDS

Transcript Sequence

Gene sequence data has not been registered.